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heterogeneous nuclear ribonucleoprotein Q (hnRNP-Q, synaptotagmin-binding cytoplasmic RNA-interacting protein, glycine- & tyrosine-rich RNA-binding protein, GRY-RBP, NS1-associated protein 1, SYNCRIP, HNRPQ, NSAP1)
Function:
1) implicated in mRNA processing mechanisms
2) translationally coupled mRNA turnover
3) component of spliceosome C complex
4) domain containing 8 Arg-Gly-Gly repeats may be involved in RNA-binding & protein-protein interactions
5) phosphorylated on Tyr in vivo
6) membrane-bound form found in microsomes is phosphorylated in vitro by insulin receptor tyrosine kinase (INSR); phosphorylation inhibited upon binding to RNA
7) cytoplasmic form is poorly phosphorylated
Structure:
- domain containing 8 Arg-Gly-Gly repeats may be involved in RNA-binding & protein-protein interactions
Compartment:
- microsome, nucleus
- Tyr phosphorylated form bound to RNA is found in microsomes
Alternative splicing: named isoforms=5
Expression:
- ubiquitously expressed
- expressed in heart, brain, pancreas, placenta, spleen, lung, liver, skeletal muscle, kidney, thymus, prostate, uterus, small intestine, colon, peripheral blood, testis
General
heterogeneous nuclear ribonucleoprotein (hnRNP)
Properties
SIZE: MW = 70 kD
entity length = 623 aa
MOTIF: RNP motif
NAME: RNP motif
SITE: 162-241
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
RNP motif
NAME: RNP motif
SITE: 243-325
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
RRM 3 {338-408}
MOTIF: Tyr phosphorylation site {Y373}
binding site
SITE: 400-561
FOR-BINDING-OF: apo B mRNA-editing protein
MOTIF: 8 RGG repeats {448-559}
MOTIF: 3 YYGY repeats {460-488}
binding site
SITE: 518-549
FOR-BINDING-OF: SMN complex
nuclear translocation signal {564-578}
Database Correlations
UniProt O60506
Pfam PF00076
References
UniProt :accession O60506
Component-of
mRNP granule complex