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structural maintenance of chromosome 1-like 1 protein; SMC1-alpha protein (SMC1A, Sb1.8, SMC1L1, DXS423E, KIAA0178, SB18, SMC1)
Function:
1) involved in chromosome cohesion during cell cycle & DNA repair
2) component of cohesin complex
- forms a heterodimer with SMC3 in cohesin complexes
3) involved in DNA repair via its interaction with BRCA1, phosphorylation by ATM, or phosphorylation by ATR
4) works as a downstream effector both in the ATM/NBS1 branch & in the ATR/MSH2 branch of S-phase checkpoint
5) interacts with POLE
6) interacts with SYCP2
7) interacts with BRCA1
8) found in a complex with CDCA5, SMC3L1, RAD21, PDS5A/APRIN & PDS5B/SCC-112 (putative)
9) interacts with BRCA, KNTC2
Compartment:
- nucleus, associates with chromatin
- before prophase, it is scattered along chromosome arms
Pathology:
- defects in SMC1L1 are the cause of X-linked Cornelia de Lange syndrome
General
nuclear protein
phosphoprotein
Properties
SIZE: MW = 143 kD
entity length = 1233 aa
COMPARTMENT: cell nucleus
MOTIF: ATP-binding site
NAME: ATP-binding site
SITE: 32-39
coiled coil {104-124}
coiled coil {163-503}
MOTIF: Ser phosphorylation site {S360}
coiled coil {660-935}
Ser phosphorylation site {S957}
Ser phosphorylation site {S962}
Ser phosphorylation site {S966}
coiled coil {991-1068}
Database Correlations
OMIM 300040
UniProt Q14683
PFAM correlations
References
UniProt :accession Q14683
Component-of
cohesion complex