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spicesome C complex
Structure:
- consists of:
- AQR, ASCC3L1, C19orf29, CDC40, CDC5L, CRNKL1, DDX23, DDX41, DDX48, DDX5, DGCR14, DHX35, DHX38, DHX8, EFTUD2, FRG1, GPATC1, HNRPA1, HNRPA2B1, HNRPA3, HNRPC, HNRPF, HNRPH1, HNRPK, HNRPM, HNRPR, HNRPU, KIAA1160, KIAA1604, LSM2, LSM3, MAGOH, MORG1, PABPC1, PLRG1, PNN, PPIE, PPIL1, PPIL3, PPWD1, PRPF19, PRPF4B, PRPF6, PRPF8, RALY, RBM22, RBM8A, RBMX, SART1, SF3A1, SF3A2, SF3A3, SF3B1, SF3B2, SF3B3, SFRS1, SKIV2L2, SNRPA1, SNRPB, SNRPB2, SNRPD1, SNRPD2, SNRPD3, SNRPE, SNRPF, SNRPG, SNW1, SRRM1, SRRM2, SYF2, SYNCRIP, TFIP11, THOC4, U2AF1, WDR57, XAB2, ZCCHC8
General
molecular complex
nuclear protein
Properties
COMPARTMENT: cell nucleus
SUBUNITS: Intron-binding protein aquarius
COMPARTMENT: cell nucleus
MOTIF: RNA-binding motif
FOR-BINDING-OF: ribonucleic acid
ASCC3L1
protein C19orf29
MOTIF: arginine-rich region {33-39}
MOTIF: arginine residue (SEVERAL)
alanine-rich region {61-65}
MOTIF: alanine residue (SEVERAL)
coiled coil {67-117}
coiled coil {157-209}
Ser phosphorylation site {S421}
pre-mRNA splicing factor PRP17
COMPARTMENT: cell nucleus
MOTIF: RNA-binding motif
FOR-BINDING-OF: ribonucleic acid
WD repeat {286-326}
WD repeat {330-369}
WD repeat {371-413}
WD repeat {416-455}
WD repeat {459-498}
WD repeat {504-545}
WD repeat {548-578}
cell division cycle 5-like protein
COMPARTMENT: cytoplasm
cell nucleus
MOTIF: HTH myb-type 1 {1-56}
MOTIF: DNA-binding motif
SITE: 31-54
HTH myb-type 2 {57-108}
MOTIF: DNA-binding motif
SITE: 82-104
coiled coil {142-245}
MOTIF: Thr phosphorylation site {T227}
PPP1R8 interaction {260-606}
MOTIF: Ser phosphorylation site {S303}
Ser phosphorylation site {S317}
Thr phosphorylation site {T377}
Thr phosphorylation site {T385}
Thr phosphorylation site {T396}
breakpoint {414}
Thr phosphorylation site {T415}
Thr phosphorylation site {T424}
Thr phosphorylation site {T429}
Thr phosphorylation site {T430}
Ser phosphorylation site {S437}
Thr phosphorylation site {T438}
Thr phosphorylation site {T442}
DAPK3 interaction {501-659}
coiled coil {676-701}
PLRG1 interaction {706-800}
coiled coil {764-802}
crooked neck-like protein 1
COMPARTMENT: cytoplasm
cell nucleus
MOTIF: proline-rich region
SITE: 207-210
MOTIF: proline residue (SEVERAL)
HAT {222-254}
HAT {256-288}
HAT {290-322}
HAT {324-355}
HAT {357-388}
HAT {390-425}
HAT {427-461}
HAT {471-503}
HAT {505-539}
HAT {549-585}
HAT {587-618}
HAT {620-652}
HAT {654-688}
HAT {690-721}
HAT {726-767}
HAT {769-807}
HAT {809-834}
ATP-dependent RNA helicase DDX23
COMPARTMENT: cell nucleus
MOTIF: Ser phosphorylation site {S14}
arginine-rich region {20-122}
MOTIF: arginine residue (SEVERAL)
Thr phosphorylation site {T25}
Ser phosphorylation site {S107}
Ser phosphorylation site {S109}
glutamate-rich region {128-240}
MOTIF: glutamate residue (SEVERAL)
Q motif {391-419}
helicase
NAME: helicase
SITE: 422-627
MOTIF: ATP-binding site
NAME: ATP-binding site
SITE: 435-442
DEAD/H box
NAME: DEAD/H box
SITE: 549-552
Helicase C-terminal {651-799}
ATP-dependent RNA helicase DDX41
COMPARTMENT: cell nucleus
MOTIF: Ser phosphorylation site {S21}
Ser phosphorylation site {S23}
Q motif {181-209}
helicase
NAME: helicase
SITE: 212-396
MOTIF: ATP-binding site
NAME: ATP-binding site
SITE: 225-232
DEAD/H box
NAME: DEAD/H box
SITE: 344-347
Helicase C-terminal {407-567}
Zn finger C2HC-type
SITE: 580-597
EFFECTOR-BOUND: Zn+2
DDX48
DEAD box protein 5
COMPARTMENT: cell nucleus
MOTIF: Ser phosphorylation site {S30}
Q motif {94-122}
helicase
NAME: helicase
SITE: 125-300
MOTIF: ATP-binding site
NAME: ATP-binding site
SITE: 138-145
Tyr phosphorylation site {Y202}
DEAD/H box
NAME: DEAD/H box
SITE: 248-251
Tyr phosphorylation site {Y297}
Helicase C-terminal {328-475}
Ser phosphorylation site {S480}
Thr phosphorylation site {T507}
Ser phosphorylation site {S520}
DiGeorge syndrome critical region 14
COMPARTMENT: cell nucleus
MOTIF: acetylation site
SITE: N-TERMINUS
EFFECTOR-BOUND: acetyl
Thr phosphorylation site {T3}
Ser phosphorylation site {S292}
Thr phosphorylation site {T386}
Ser phosphorylation site {S391}
Ser phosphorylation site {S395}
Thr phosphorylation site {T437}
ATP-dependent RNA helicase DHX35
COMPARTMENT: cell nucleus
MOTIF: helicase
NAME: helicase
SITE: 64-229
MOTIF: ATP-binding site
NAME: ATP-binding site
SITE: 77-84
DEAD/H box
NAME: DEAD/H box
SITE: 176-179
Helicase C-terminal {261-438}
DNA-binding motif
active site
MOTIF: P-loop
FOR-BINDING-OF: adenosine triphosphate
pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
COMPARTMENT: cell nucleus
MOTIF: helicase
NAME: helicase
SITE: 542-705
MOTIF: ATP-binding site
NAME: ATP-binding site
SITE: 555-562
DEAD/H box
NAME: DEAD/H box
SITE: 652-655
Helicase C-terminal {727-902}
Ser phosphorylation site {S1194}
ATP-dependent RNA helicase DHX8
COMPARTMENT: cell nucleus
MOTIF: acetylation site
SITE: N-TERMINUS
EFFECTOR-BOUND: acetyl
lysine-rich region {172-175}
MOTIF: lysine residue (SEVERAL)
arginine/serine-rich region (RS domain) {176-228}
MOTIF: serine residue (SEVERAL)
arginine residue (SEVERAL)
Ser phosphorylation site {S224}
Ser phosphorylation site {S228}
Ser phosphorylation site {S230}
S1 domain {265-336}
Ser phosphorylation site {S395}
Thr phosphorylation site {T554}
Ser phosphorylation site {S557}
helicase
NAME: helicase
SITE: 575-738
MOTIF: ATP-binding site
NAME: ATP-binding site
SITE: 588-595
DEAD/H box
NAME: DEAD/H box
SITE: 685-688
Helicase C-terminal {756-936}
116 kD U5 small nuclear ribonucleoprotein
COMPARTMENT: cell nucleus
MOTIF: GTP-binding site
SITE: 136-143
GTP-binding site
SITE: 204-208
GTP-binding site
SITE: 258-261
protein FRG1
COMPARTMENT: cell nucleus
MOTIF: lysine-rich region {8-32}
MOTIF: lysine residue (SEVERAL)
nuclear translocation signal {22-32}
nuclear translocation signal {235-251}
G patch domain-containing protein 1
MOTIF: Ser phosphorylation site {S6}
Thr phosphorylation site {T17}
G-patch domain {152-198}
hnRNP-A1
COMPARTMENT: cytoplasm
cell nucleus
MOTIF: acetylation site
SITE: N-TERMINUS
EFFECTOR-BOUND: acetyl
Globular A {4-94}
MOTIF: Ser phosphorylation site {S4}
Ser phosphorylation site {S6}
RNP motif
NAME: RNP motif
SITE: 14-97
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
Ser phosphorylation site {S91}
Globular B {95-185}
MOTIF: Ser phosphorylation site {S95}
RNP motif
NAME: RNP motif
SITE: 105-184
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
Thr phosphorylation site {T138}
Ser phosphorylation site {S142}
Tyr phosphorylation site {Y167}
glycine-rich region {195-372}
MOTIF: binding site
SITE: 218-240
FOR-BINDING-OF: ribonucleic acid
Ser phosphorylation site {S311}
M9 {320-357}
Ser phosphorylation site {S338}
Tyr phosphorylation site {Y347}
Ser phosphorylation site {S368}
hnRNP-A2/B1
COMPARTMENT: cytoplasm
cell nucleus
MOTIF: acetylation site
SITE: N-TERMINUS
EFFECTOR-BOUND: acetyl
nuclear translocation signal {9-15}
RNP motif
NAME: RNP motif
SITE: 21-104
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
Ser phosphorylation site {S85}
RNP motif
NAME: RNP motif
SITE: 112-191
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
Thr phosphorylation site {T176}
glycine-rich region {202-353}
MOTIF: Ser phosphorylation site {S212}
Ser phosphorylation site {S225}
Ser phosphorylation site {S259}
nuclear translocation signal {308-347}
Ser phosphorylation site {S324}
Ser phosphorylation site {S341}
Ser phosphorylation site {S344}
Tyr phosphorylation site {Y347}
heterogeneous nuclear ribonucleoprotein A3
COMPARTMENT: cell nucleus
MOTIF: acetylation site
SITE: N-TERMINUS
EFFECTOR-BOUND: acetyl
Ser phosphorylation site {S14}
RNP motif
NAME: RNP motif
SITE: 35-118
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
Ser phosphorylation site {S116}
RNP motif
NAME: RNP motif
SITE: 126-205
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
glycine-rich region {211-378}
MOTIF: Ser phosphorylation site {S355}
Ser phosphorylation site {S356}
Ser phosphorylation site {S358}
Tyr phosphorylation site {Y360}
Tyr phosphorylation site {Y364}
Ser phosphorylation site {S366}
Ser phosphorylation site {S370}
Ser phosphorylation site {S375}
hnRNP-C1/C2
COMPARTMENT: cell nucleus
MOTIF: acetylation site
SITE: N-TERMINUS
EFFECTOR-BOUND: acetyl
RNP motif
NAME: RNP motif
SITE: 16-87
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
Ser phosphorylation site {S113}
Ser phosphorylation site {S120}
Ser phosphorylation site {S121}
Ser phosphorylation site {S138}
nuclear translocation signal {155-161}
Ser phosphorylation site {S162}
acidic region {181-303}
MOTIF: acidic residue (SEVERAL)
Ser phosphorylation site {S233}
Ser phosphorylation site {S238}
Ser phosphorylation site {S239}
Ser phosphorylation site {S240}
Ser phosphorylation site {S241}
Ser phosphorylation site {S253}
Ser phosphorylation site {S260}
Ser phosphorylation site {S299}
Ser phosphorylation site {S306}
heterogeneous nuclear ribonucleoprotein F
COMPARTMENT: cell nucleus
MOTIF: acetylation site
SITE: N-TERMINUS
EFFECTOR-BOUND: acetyl
RNP motif
NAME: RNP motif
SITE: 13-85
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
arginine residue {16}
tryptophan residue {20}
arginine residue {52}
arginine residue {75}
RNA interaction {81-86}
Ser phosphorylation site {S104}
RNP motif
NAME: RNP motif
SITE: 111-188
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
arginine residue {116}
phenylalanine residue {120}
lysine residue {150}
Ser phosphorylation site {S161}
lysine residue {173}
RNA interaction {179-184}
Ser phosphorylation site {S187}
Tyr phosphorylation site {Y246}
RNP motif
NAME: RNP motif
SITE: 289-366
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
arginine residue {294}
tyrosine residue {298}
Ser phosphorylation site {S310}
arginine residue {326}
arginine residue {349}
RNA interaction {355-360}
heterogeneous nuclear ribonucleoprotein H
COMPARTMENT: cell nucleus
MOTIF: acetylation site
SITE: N-TERMINUS
EFFECTOR-BOUND: acetyl
RNP motif
NAME: RNP motif
SITE: 11-90
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
Ser phosphorylation site {S23}
Ser phosphorylation site {S63}
Thr phosphorylation site {T100}
Ser phosphorylation site {S104}
Thr phosphorylation site {T107}
RNP motif
NAME: RNP motif
SITE: 111-188
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
domain {234-433}
MOTIF: consensus repeat {234-249}
Tyr phosphorylation site {Y246}
RNP motif
NAME: RNP motif
SITE: 289-364
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
Tyr phosphorylation site {Y306}
Ser phosphorylation site {S310}
consensus repeat {354-392}
consensus repeat {354-372}
consensus repeat {374-392}
consensus repeat {418-433}
heterogeneous nuclear ribonucleoprotein K
COMPARTMENT: cytoplasm
cell nucleus
MOTIF: acetylation site
SITE: N-TERMINUS
EFFECTOR-BOUND: acetyl
Thr phosphorylation site {T3}
ASFV p30 interaction {35-197}
MOTIF: Ser phosphorylation site {S36}
KH domain
SITE: 42-104
FOR-BINDING-OF: ribonucleic acid
consensus repeat {54-76}
consensus repeat {59-62}
SEQUENCE-IS: GXGG
Ser phosphorylation site {S116}
KH domain
SITE: 144-209
FOR-BINDING-OF: ribonucleic acid
ZIK1 interaction {209-337}
MOTIF: Ser phosphorylation site {S214}
Ser phosphorylation site {S216}
binding site
SITE: 236-273
FOR-BINDING-OF: ribonucleic acid
consensus repeat {245-250}
consensus repeat {257-260}
SEQUENCE-IS: GXGG
consensus repeat {267-270}
SEQUENCE-IS: GXGG
Ser phosphorylation site {S284}
proline-rich region
SITE: 289-294
MOTIF: proline residue (SEVERAL)
consensus repeat {295-298}
SEQUENCE-IS: GXGG
proline-rich region
SITE: 310-315
MOTIF: proline residue (SEVERAL)
consensus repeat {324-329}
Ser phosphorylation site {S379}
KH domain
SITE: 387-451
FOR-BINDING-OF: ribonucleic acid
MOTIF: consensus repeat {399-421}
consensus repeat {404-407}
SEQUENCE-IS: GXGG
heterogeneous nuclear ribonucleoprotein M
COMPARTMENT: cell nucleus
MOTIF: acetylation site
SITE: N-TERMINUS
EFFECTOR-BOUND: acetyl
RNP motif
NAME: RNP motif
SITE: 71-149
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
RNP motif
NAME: RNP motif
SITE: 204-281
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
glycine-rich region {390-396}
27 X 6 AA repeats of [GEVSTPAN]-[ILMV]- [DE]-[RH]-[MLVI]-[GAV] {400-608}
MOTIF: consensus repeat {400-405}
consensus repeat {407-412}
consensus repeat {415-420}
consensus repeat {426-431}
Ser phosphorylation site {S432}
consensus repeat {433-438}
consensus repeat {440-445}
consensus repeat {446-451}
consensus repeat {453-458}
consensus repeat {461-466}
consensus repeat {468-473}
Ser phosphorylation site {S468}
consensus repeat {475-480}
consensus repeat {482-487}
consensus repeat {493-498}
consensus repeat {500-505}
consensus repeat {507-512}
Ser phosphorylation site {S513}
consensus repeat {514-519}
consensus repeat {521-526}
consensus repeat {528-533}
Ser phosphorylation site {S528}
consensus repeat {540-545}
consensus repeat {547-552}
consensus repeat {554-559}
consensus repeat {562-567}
consensus repeat {567-572}
consensus repeat {575-580}
consensus repeat {580-585}
consensus repeat {588-593}
Ser phosphorylation site {S588}
consensus repeat {603-608}
glycine-rich region {612-616}
Ser phosphorylation site {S618}
Ser phosphorylation site {S633}
Ser phosphorylation site {S637}
RNP motif
NAME: RNP motif
SITE: 653-729
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
Ser phosphorylation site {S701}
heterogeneous nuclear ribonucleoprotein R
COMPARTMENT: cytoplasm
cell nucleus
MOTIF: acidic region {2-153}
MOTIF: acidic residue (SEVERAL)
acetylation site
SITE: N-TERMINUS
EFFECTOR-BOUND: acetyl
RNP motif
NAME: RNP motif
SITE: 165-244
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
RNP motif
NAME: RNP motif
SITE: 246-328
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
RNP motif
NAME: RNP motif
SITE: 341-411
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
nuclear translocation signal {412-418}
binding site
SITE: 447-567
FOR-BINDING-OF: ribonucleic acid
MOTIF: domain {462-497}
consensus repeat {462-471}
consensus repeat {472-482}
consensus repeat {488-497}
glutamine-rich region {579-633}
MOTIF: glutamine residue (SEVERAL)
heterogeneous nuclear ribonucleoprotein U
COMPARTMENT: cell nucleus
MOTIF: acidic region {2-160}
MOTIF: acidic residue (SEVERAL)
acetylation site
SITE: N-TERMINUS
EFFECTOR-BOUND: acetyl
Ser phosphorylation site {S4}
SAP {8-42}
MOTIF: Ser phosphorylation site {S26}
Ser phosphorylation site {S59}
Ser phosphorylation site {S66}
glutamate-rich region {84-94}
MOTIF: glutamate residue (SEVERAL)
glutamine-rich region {161-209}
MOTIF: glutamine residue (SEVERAL)
Ser phosphorylation site {S188}
B30.2/SPRY {267-464}
MOTIF: Ser phosphorylation site {S271}
Tyr phosphorylation site {Y473}
ATP-binding site
NAME: ATP-binding site
SITE: 504-511
glycine-rich region {703-825}
MOTIF: binding site
SITE: 714-739
FOR-BINDING-OF: ribonucleic acid
glycine-rich region {740-750}
Pre-mRNA-splicing factor ISY1 homolog
COMPARTMENT: cell nucleus
MOTIF: glutamate-rich region {201-211}
MOTIF: glutamate residue (SEVERAL)
Ser phosphorylation site {S222}
Ser phosphorylation site {S227}
Ser phosphorylation site {S247}
nucampholin homolog
COMPARTMENT: cell nucleus
MOTIF: arginine-rich region {16-97}
MOTIF: arginine residue (SEVERAL)
lysine-rich region {116-119}
MOTIF: lysine residue (SEVERAL)
MIF4G {163-346}
glutamate-rich region {423-438}
MOTIF: glutamate residue (SEVERAL)
RNA-binding motif
FOR-BINDING-OF: ribonucleic acid
MA3 {455-561}
serine-rich region {666-713}
MOTIF: serine residue (SEVERAL)
U6 snRNA-associated Sm-like protein LSm2
COMPARTMENT: cell nucleus
MOTIF: RNA-binding motif
FOR-BINDING-OF: ribonucleic acid
U6 snRNA-associated Sm-like protein LSm3
COMPARTMENT: cell nucleus
MOTIF: RNA-binding motif
FOR-BINDING-OF: ribonucleic acid
protein mago nashi homolog
COMPARTMENT: cell nucleus
MOTIF: RNA-binding motif
FOR-BINDING-OF: ribonucleic acid
mitogen-activated protein kinase organizer 1
COMPARTMENT: cytoplasm
cell nucleus
MOTIF: WD repeat {23-62}
WD repeat {65-104}
WD repeat {107-146}
WD repeat {151-188}
WD repeat {190-228}
WD repeat {231-272}
WD repeat {275-313}
polyadenylate-binding protein 1
COMPARTMENT: cytoplasm
cell nucleus
MOTIF: RNP motif
NAME: RNP motif
SITE: 11-89
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
Ser phosphorylation site {S96}
RNP motif
NAME: RNP motif
SITE: 99-175
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
Tyr phosphorylation site {Y116}
binding site
SITE: 166-289
FOR-BINDING-OF: cold shock domain-containing protein E1
MOTIF: RNP motif
NAME: RNP motif
SITE: 191-268
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
RNP motif
NAME: RNP motif
SITE: 294-370
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
Ser phosphorylation site {S315}
Ser phosphorylation site {S342}
Tyr phosphorylation site {Y364}
alanine-rich region {495-501}
MOTIF: alanine residue (SEVERAL)
PABC {542-619}
pleiotropic regulator 1
COMPARTMENT: cell nucleus
MOTIF: WD repeat {202-241}
WD repeat {244-283}
WD repeat {286-325}
WD repeat {328-367}
WD repeat {370-410}
WD repeat {411-449}
WD repeat {460-499}
pinin
COMPARTMENT: cytoplasm
cell nucleus
MOTIF: binding site
SITE: 1-283
FOR-BINDING-OF: RNA-binding protein with serine-rich domain 1
MOTIF: 5' splicing {1-166}
binding site
SITE: 1-97
FOR-BINDING-OF: keratin, type II cytoskeletal 8
keratin, type I cytoskeletal 18
keratin, type I cytoskeletal 19
coiled coil {1-31}
acetylation site
SITE: 1-1
EFFECTOR-BOUND: acetyl
Ser phosphorylation site {S65}
coiled coil {162-233}
glutamate-rich region {171-470}
MOTIF: glutamate residue (SEVERAL)
coiled coil {286-378}
Ser phosphorylation site {S346}
Ser phosphorylation site {S442}
coiled coil {445-466}
glutamine-rich region {468-519}
MOTIF: glutamine residue (SEVERAL)
serine-rich region {551-703}
MOTIF: serine residue (SEVERAL)
binding site
SITE: 605-716
FOR-BINDING-OF: cyclophilin G
MOTIF: arginine-rich region {631-716}
MOTIF: arginine residue (SEVERAL)
cyclophilin E
COMPARTMENT: cell nucleus
MOTIF: RNP motif
NAME: RNP motif
SITE: 6-84
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
alanine-rich region {60-63}
MOTIF: alanine residue (SEVERAL)
active site
SITE: 143-299
peptidyl-prolyl cis-trans isomerase-like 1
MOTIF: active site
SITE: 10-164
MOTIF: Cyclosporin A binding {54-65}
Cyclosporin A binding {70-71}
Cyclosporin A binding {99-104}
Cyclosporin A binding {109-113}
binding site
SITE: 119-119
FOR-BINDING-OF: Cyclosporin A
binding site
SITE: 125-125
FOR-BINDING-OF: Cyclosporin A
peptidyl-prolyl cis-trans isomerase-like 3
MOTIF: active site
SITE: 1-154
peptidylprolyl isomerase domain and WD repeat-containing protein 1
MOTIF: arginine-rich region {12-17}
MOTIF: arginine residue (SEVERAL)
WD repeat {88-126}
WD repeat {131-170}
WD repeat {221-260}
WD repeat {278-319}
active site
SITE: 490-645
pre-mRNA-processing factor 19
COMPARTMENT: cell nucleus
MOTIF: U-box {1-68}
WD repeat {219-259}
WD repeat {262-301}
WD repeat {304-345}
WD repeat {348-387}
WD repeat {390-429}
WD repeat {433-472}
WD repeat {473-503}
serine/threonine protein kinase PRP4 homolog
COMPARTMENT: cell nucleus
STATE: active state
MOTIF: acetylation site
SITE: N-TERMINUS
EFFECTOR-BOUND: acetyl
Thr phosphorylation site {T6}
Ser phosphorylation site {S8}
Ser phosphorylation site {S20}
Ser phosphorylation site {S23}
Ser phosphorylation site {S32}
Ser phosphorylation site {S36}
lysine-rich region {39-496}
MOTIF: lysine residue (SEVERAL)
histidine-rich region {40-78}
MOTIF: histidine residue (SEVERAL)
Ser phosphorylation site {S87}
Ser phosphorylation site {S93}
Tyr phosphorylation site {Y140}
Ser phosphorylation site {S142}
Ser phosphorylation site {S144}
Ser phosphorylation site {S239}
Ser phosphorylation site {S241}
Ser phosphorylation site {S257}
Ser phosphorylation site {S277}
Ser phosphorylation site {S292}
Ser phosphorylation site {S294}
Ser phosphorylation site {S328}
Ser phosphorylation site {S354}
Ser phosphorylation site {S356}
Ser phosphorylation site {S366}
Ser phosphorylation site {S368}
Ser phosphorylation site {S381}
Thr phosphorylation site {T385}
Ser phosphorylation site {S387}
Ser phosphorylation site {S410}
Ser phosphorylation site {S411}
Ser phosphorylation site {S427}
Ser phosphorylation site {S431}
Ser phosphorylation site {S437}
Ser phosphorylation site {S518}
Ser phosphorylation site {S519}
Ser phosphorylation site {S520}
Ser phosphorylation site {S569}
Thr phosphorylation site {T576}
Ser phosphorylation site {S578}
Ser phosphorylation site {S580}
kinase domain
SITE: 687-1006
MOTIF: ATP-binding site
NAME: ATP-binding site
SITE: 693-701
ATP-binding site
NAME: ATP-binding site
SITE: 717-717
aspartate residue {D815}
Tyr phosphorylation site {Y849}
Ser phosphorylation site {S852}
pre-mRNA-processing factor 6
COMPARTMENT: cell nucleus
MOTIF: HAT {384-416}
HAT {418-444}
HAT {445-476}
HAT {554-586}
HAT {588-620}
HAT {622-654}
HAT {689-721}
HAT {723-755}
HAT {855-887}
pre-mRNA-processing-splicing factor 8
COMPARTMENT: cell nucleus
MOTIF: Thr phosphorylation site {T1318}
Involved in interaction with pre-mRNA 5' splice site {1669-2034}
MPN {2099-2233}
RNA-binding protein Raly
MOTIF: RNP motif
NAME: RNP motif
SITE: 21-92
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
glycine-rich region {225-251}
BKRF1 Epitope {227-253}
pre-mRNA-splicing factor RBM22
COMPARTMENT: cell nucleus
MOTIF: Zinc finger
NAME: Zinc finger
SITE: 160-185
EFFECTOR-BOUND: Zn+2
RNP motif
NAME: RNP motif
SITE: 232-305
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
proline-rich region
SITE: 327-407
MOTIF: proline residue (SEVERAL)
RNA-binding protein 8A
COMPARTMENT: cytoplasm
cell nucleus
MOTIF: acetylation site
SITE: N-TERMINUS
EFFECTOR-BOUND: acetyl
Ser phosphorylation site {S42}
Ser phosphorylation site {S46}
Ser phosphorylation site {S56}
RNP motif
NAME: RNP motif
SITE: 73-151
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
Ser phosphorylation site {S166}
Ser phosphorylation site {S168}
heterogeneous nuclear ribonucleoprotein G
COMPARTMENT: cell nucleus
MOTIF: acetylation site
SITE: N-TERMINUS
EFFECTOR-BOUND: acetyl
RNP motif
NAME: RNP motif
SITE: 8-86
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
Ser phosphorylation site {S58}
Ser phosphorylation site {S88}
Ser phosphorylation site {S165}
Ser phosphorylation site {S208}
Ser phosphorylation site {S277}
Ser phosphorylation site {S280}
Ser phosphorylation site {S326}
Tyr phosphorylation site {Y327}
Ser phosphorylation site {S329}
Ser phosphorylation site {S330}
Ser phosphorylation site {S332}
Ser phosphorylation site {S352}
U4/U6.U5 tri-snRNP-associated protein 1
COMPARTMENT: cell nucleus
MOTIF: coiled coil {157-231}
Thr phosphorylation site {T392}
RNA-binding motif
FOR-BINDING-OF: ribonucleic acid
DNA-binding motif
coiled coil {490-533}
splicing factor 3A subunit 1
COMPARTMENT: cell nucleus
MOTIF: proline-rich region
SITE: 10-16
MOTIF: proline residue (SEVERAL)
SURP {52-94}
glutamine-rich region {118-122}
MOTIF: glutamine residue (SEVERAL)
Thr phosphorylation site {T124}
SURP {166-208}
glutamate-rich region {260-267}
MOTIF: glutamate residue (SEVERAL)
Ser phosphorylation site {S320}
Ser phosphorylation site {S329}
Ser phosphorylation site {S359}
proline-rich region
SITE: 369-372
MOTIF: proline residue (SEVERAL)
Tyr phosphorylation site {Y456}
proline-rich region
SITE: 557-560
MOTIF: proline residue (SEVERAL)
proline-rich region
SITE: 672-675
MOTIF: proline residue (SEVERAL)
Ubiquitin-like {707-793}
MOTIF: Tyr phosphorylation site {Y759}
splicing factor 3A subunit 2
COMPARTMENT: cell nucleus
MOTIF: Zinc finger
NAME: Zinc finger
SITE: 54-84
EFFECTOR-BOUND: Zn+2
RNA-binding motif
FOR-BINDING-OF: ribonucleic acid
proline residue {233-236} (4)
proline residue {252-256} (5)
proline residue {458-462} (5)
splicing factor 3A subunit 3
COMPARTMENT: cell nucleus
MOTIF: acetylation site
SITE: 1-1
EFFECTOR-BOUND: acetyl
Thr phosphorylation site {T277}
glutamate-rich region {354-362}
MOTIF: glutamate residue (SEVERAL)
Ser phosphorylation site {S365}
Ser phosphorylation site {S367}
Ser phosphorylation site {S369}
Zn finger matrin-type
NAME: Zn finger matrin-type
SITE: 406-437
EFFECTOR-BOUND: Zn+2
MOTIF: Tyr phosphorylation site {Y414}
splicing factor 3B subunit 1
COMPARTMENT: cytoplasm
cell nucleus
MOTIF: Thr phosphorylation site {T142}
Thr phosphorylation site {T207}
Thr phosphorylation site {T211}
PPP1R8 interaction {223-491}
MOTIF: Thr phosphorylation site {T223}
Thr phosphorylation site {T227}
Thr phosphorylation site {T235}
Thr phosphorylation site {T244}
Thr phosphorylation site {T248}
Thr phosphorylation site {T267}
Thr phosphorylation site {T296}
Thr phosphorylation site {T299}
Thr phosphorylation site {T313}
Thr phosphorylation site {T316}
Thr phosphorylation site {T326}
Thr phosphorylation site {T328}
Ser phosphorylation site {S344}
Thr phosphorylation site {T350}
Thr phosphorylation site {T354}
HEAT repeat {529-568}
HEAT repeat {569-603}
HEAT repeat {604-641}
HEAT repeat {643-677}
HEAT repeat {680-718}
HEAT repeat {763-801}
HEAT repeat {843-881}
HEAT repeat {1010-1048}
HEAT repeat {1052-1090}
HEAT repeat {1122-1160}
HEAT repeat {1163-1201}
splicing factor 3B subunit 2
COMPARTMENT: cell nucleus
MOTIF: SAP {1-35}
proline-rich region
SITE: 68-73
MOTIF: proline residue (SEVERAL)
proline-rich region
SITE: 81-90
MOTIF: proline residue (SEVERAL)
proline-rich region
SITE: 106-109
MOTIF: proline residue (SEVERAL)
proline-rich region
SITE: 226-230
MOTIF: proline residue (SEVERAL)
Ser phosphorylation site {S266}
glutamate-rich region {269-274}
MOTIF: glutamate residue (SEVERAL)
Ser phosphorylation site {S284}
Ser phosphorylation site {S286}
Thr phosphorylation site {T288}
lysine-rich region {308-312}
MOTIF: lysine residue (SEVERAL)
Ser phosphorylation site {S320}
Ser phosphorylation site {S337}
Ser phosphorylation site {S339}
Ser phosphorylation site {S393}
Ser phosphorylation site {S408}
Ser phosphorylation site {S412}
Ser phosphorylation site {S413}
glutamate-rich region {676-679}
MOTIF: glutamate residue (SEVERAL)
glutamate-rich region {697-703}
MOTIF: glutamate residue (SEVERAL)
Ser phosphorylation site {S755}
Thr phosphorylation site {T757}
splicing factor 3B subunit 3
COMPARTMENT: cell nucleus
MOTIF: RNA-binding motif
FOR-BINDING-OF: ribonucleic acid
phosphorylation site
SFRS1
superkiller viralicidic activity 2-like 2
COMPARTMENT: cell nucleus
MOTIF: acetylation site
SITE: N-TERMINUS
EFFECTOR-BOUND: acetyl
helicase
NAME: helicase
SITE: 148-304
MOTIF: ATP-binding site
NAME: ATP-binding site
SITE: 161-168
DEAD/H box
NAME: DEAD/H box
SITE: 252-255
Helicase C-terminal {405-577}
U2-A' protein
MOTIF: RNP motif
NAME: RNP motif (2)
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
snRNP polypeptide Sm-B
COMPARTMENT: cell nucleus
MOTIF: RNA-binding motif
FOR-BINDING-OF: ribonucleic acid
U2-B'' protein
MOTIF: RNP motif
NAME: RNP motif (2)
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
small nuclear ribonucleoprotein Sm D1
COMPARTMENT: cell nucleus
MOTIF: lysine-rich region {86-119}
MOTIF: lysine residue (SEVERAL)
small nuclear ribonucleoprotein Sm D2
COMPARTMENT: cell nucleus
MOTIF: RNA-binding motif
FOR-BINDING-OF: ribonucleic acid
small nuclear ribonucleoprotein Sm D3
COMPARTMENT: cell nucleus
MOTIF: RNA-binding motif
FOR-BINDING-OF: ribonucleic acid
basic region {84-126}
MOTIF: consensus repeat {110-111}
consensus repeat {112-113}
consensus repeat {114-115}
consensus repeat {116-117}
consensus repeat {118-119}
U1/U2-E protein
small nuclear ribonucleoprotein F
COMPARTMENT: cell nucleus
small nuclear ribonucleoprotein G
COMPARTMENT: cell nucleus
SNW domain-containing protein 1
COMPARTMENT: cell nucleus
MOTIF: acetylation site
SITE: N-TERMINUS
EFFECTOR-BOUND: acetyl
SNW {174-339}
MOTIF: proline-rich region
SITE: 219-233
MOTIF: proline residue (SEVERAL)
Ser phosphorylation site {S224}
Ser phosphorylation site {S232}
Ser phosphorylation site {S234}
serine/arginine repetitive matrix protein 1
COMPARTMENT: cell nucleus
MOTIF: domain {1-156}
MOTIF: binding site
SITE: 1-151
FOR-BINDING-OF: deoxyribonucleic acid (DNA)
RNA
Ser phosphorylation site {S10}
PWI {45-118}
arginine-rich region {163-726}
MOTIF: arginine residue (SEVERAL)
proline-rich region
SITE: 210-417
MOTIF: proline residue (SEVERAL)
Ser phosphorylation site {S211}
Thr phosphorylation site {T220}
serine-rich region {278-756}
MOTIF: Ser phosphorylation site (11) {389-549}
domain {300-688}
proline-rich region
SITE: 550-799
MOTIF: proline residue (SEVERAL)
Ser phosphorylation site (10) {560-616}
Ser phosphorylation site (10) {626-775}
Ser phosphorylation site {S781}
lysine-rich region {809-835}
MOTIF: lysine residue (SEVERAL)
alanine-rich region {836-865}
MOTIF: alanine residue (SEVERAL)
serine/arginine repetitive matrix protein 2
COMPARTMENT: cell nucleus
MOTIF: coiled coil {60-92}
Ser phosphorylation site {S142}
serine-rich region {177-2731}
MOTIF: serine residue (SEVERAL)
lysine-rich region {186-246}
MOTIF: lysine residue (SEVERAL)
binding site
SITE: 197-259
FOR-BINDING-OF: ribonucleic acid
Ser phosphorylation site {S250}
Thr phosphorylation site {T252}
Thr phosphorylation site {T274}
Ser phosphorylation site {S297}
proline-rich region
SITE: 350-447
MOTIF: proline residue (SEVERAL)
Ser phosphorylation site {S351}
Ser phosphorylation site {S353}
Thr phosphorylation site {T367}
Ser phosphorylation site {S424}
arginine-rich region {462-816}
MOTIF: arginine residue (SEVERAL)
Ser phosphorylation site {S778}
Ser phosphorylation site {S780}
Ser phosphorylation site {S783}
Ser phosphorylation site {S820}
Ser phosphorylation site {S857}
Thr phosphorylation site {T866}
Ser phosphorylation site {S871}
Ser phosphorylation site {S876}
Ser phosphorylation site {S901}
Thr phosphorylation site {T903}
Ser phosphorylation site {S908}
Ser phosphorylation site {S914}
Ser phosphorylation site {S924}
Ser phosphorylation site {S952}
Ser phosphorylation site {S954}
Ser phosphorylation site {S988}
Ser phosphorylation site {S994}
Thr phosphorylation site {T1003}
Thr phosphorylation site {T1043}
Ser phosphorylation site {S1069}
Ser phosphorylation site {S1072}
Ser phosphorylation site {S1073}
Ser phosphorylation site {S1079}
Ser phosphorylation site {S1083}
Ser phosphorylation site {S1103}
Ser phosphorylation site {S1124}
Ser phosphorylation site {S1132}
Ser phosphorylation site {S1179}
Ser phosphorylation site {S1188}
Ser phosphorylation site {S1214}
Ser phosphorylation site {S1219}
Ser phosphorylation site {S1320}
Ser phosphorylation site {S1326}
Ser phosphorylation site {S1329}
Ser phosphorylation site {S1397}
Ser phosphorylation site {S1404}
Ser phosphorylation site {S1421}
Ser phosphorylation site {S1423}
Ser phosphorylation site {S1441}
Ser phosphorylation site {S1443}
Ser phosphorylation site {S1444}
Thr phosphorylation site {T1453}
Ser phosphorylation site {S1483}
Thr phosphorylation site {T1492}
Ser phosphorylation site {S1499}
Ser phosphorylation site {S1501}
Ser phosphorylation site {S1502}
Thr phosphorylation site {T1511}
Ser phosphorylation site {S1517}
Ser phosphorylation site {S1519}
Ser phosphorylation site {S1522}
Ser phosphorylation site {S1559}
Ser phosphorylation site {S1579}
Ser phosphorylation site {S1581}
Ser phosphorylation site {S1582}
Ser phosphorylation site {S1600}
Ser phosphorylation site {S1601}
Ser phosphorylation site {S1618}
Ser phosphorylation site {S1621}
arginine-rich region {1666-2089}
MOTIF: arginine residue (SEVERAL)
Ser phosphorylation site {S1842}
Thr phosphorylation site {T1844}
Ser phosphorylation site {S1878}
Thr phosphorylation site {T1880}
Thr phosphorylation site {T1962}
Ser phosphorylation site {S2011}
Ser phosphorylation site {S2032}
Thr phosphorylation site {T2034}
Ser phosphorylation site {S2044}
Ser phosphorylation site {S2046}
Ser phosphorylation site {S2067}
Ser phosphorylation site {S2071}
Thr phosphorylation site {T2092}
Thr phosphorylation site {T2104}
alanine-rich region {2182-2378}
MOTIF: alanine residue (SEVERAL)
Ser phosphorylation site {S2272}
Thr phosphorylation site {T2289}
Thr phosphorylation site {T2291}
Thr phosphorylation site {T2316}
Ser phosphorylation site {S2335}
Ser phosphorylation site {S2382}
Ser phosphorylation site {S2398}
Ser phosphorylation site {S2407}
Thr phosphorylation site {T2409}
Ser phosphorylation site {S2426}
Ser phosphorylation site {S2449}
Ser phosphorylation site {S2581}
arginine-rich region {2673-2750}
MOTIF: arginine residue (SEVERAL)
Ser phosphorylation site {S2692}
Ser phosphorylation site {S2694}
Ser phosphorylation site {S2714}
pre-mRNA-splicing factor SYF2
COMPARTMENT: cell nucleus
MOTIF: coiled coil {66-91}
heterogeneous nuclear ribonucleoprotein Q
MOTIF: RNP motif
NAME: RNP motif
SITE: 162-241
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
RNP motif
NAME: RNP motif
SITE: 243-325
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
RRM 3 {338-408}
MOTIF: Tyr phosphorylation site {Y373}
binding site
SITE: 400-561
FOR-BINDING-OF: apo B mRNA-editing protein
MOTIF: 8 RGG repeats {448-559}
MOTIF: 3 YYGY repeats {460-488}
binding site
SITE: 518-549
FOR-BINDING-OF: SMN complex
nuclear translocation signal {564-578}
tuftelin-interacting protein 11
COMPARTMENT: cytoplasm
cell nucleus
MOTIF: Ser phosphorylation site {S98}
G-patch domain {149-195}
Ser phosphorylation site {S210}
THO complex subunit 4
COMPARTMENT: cell nucleus
MOTIF: acetylation site
SITE: 1-1
EFFECTOR-BOUND: acetyl
glycine-rich region {20-230}
MOTIF: RRM {105-182}
U2 auxilary factor p35
MOTIF: RNA-binding motif
FOR-BINDING-OF: ribonucleic acid
WD repeat protein 57
COMPARTMENT: cell nucleus
MOTIF: WD repeat {64-103}
WD repeat {107-146}
WD repeat {149-189}
WD repeat {191-230}
WD repeat {233-272}
WD repeat {283-322}
WD repeat {325-357}
XPA-binding protein 2
COMPARTMENT: cell nucleus
MOTIF: HAT {15-47}
HAT {48-80}
HAT {90-122}
HAT {124-158}
HAT {160-192}
HAT {198-230}
HAT {235-268}
HAT {270-305}
HAT {369-407}
HAT {498-530}
HAT {532-566}
HAT {571-605}
HAT {643-677}
HAT {679-713}
zinc finger CCHC domain-containing protein 8
MOTIF: coiled coil {45-80}
Zn finger C2HC-type
SITE: 227-244
EFFECTOR-BOUND: Zn+2
proline-rich region
SITE: 466-501
MOTIF: proline residue (SEVERAL)
Thr phosphorylation site {T479}
Thr phosphorylation site {T485}
Thr phosphorylation site {T492}
Thr phosphorylation site {T496}
Ser phosphorylation site {S500}
coiled coil {516-539}
References
UniProt :accession O60506
Components
116 kD U5 small nuclear ribonucleoprotein (EFTUD2)
ATP-dependent RNA helicase DDX23; 100 kD U5 snRNP-specific protein; DEAD box protein 23; PRP28 homolog; U5-100kD (DDX23)
ATP-dependent RNA helicase DDX41; DEAD box protein 41; DEAD box protein abstrakt homolog (DDX41, ABS)
ATP-dependent RNA helicase DHX35; DEAH box protein 35 (DHX35, C20orf15, DDX35)
ATP-dependent RNA helicase DHX8; DEAH box protein 8; RNA helicase HRH1 (DHX8 DDX8)
cell division cycle 5-like protein; Cdc5-like protein; Pombe cdc5-related protein (CDC5L, KIAA0432, PCDC5RP)
crooked neck-like protein 1 (crooked neck homolog, hCrn, CRNKL1, CRN, CGI-201, MSTP021)
cyclophilin E (cyclophilin 3, 33kD peptidyl-prolyl cis-trans isomerase, cyclophilin 33, rotamase E, PPIE, CYP33)
DEAD box protein 5; ATP-dependent RNA helicase DDX5; RNA helicase p68 (DDX5, G17P1, HELR, HLR1)
DiGeorge syndrome critical region 14; DiGeorge syndrome critical region 13; DiGeorge syndrome protein H; protein DGCR14; DGS-H; protein ES2 (DGCR14, DGCR13, DGSH, DGSI, ES2)
G patch domain-containing protein 1 (evolutionarily conserved G-patch domain-containing protein, GPATCH1, ECGP, GPATC1)
heterogeneous nuclear ribonucleoprotein-A1 (hnRNP-A1)
heterogeneous nuclear ribonucleoprotein A3; hnRNP A3 (HNRNPA3, HNRPA3)
heterogeneous nuclear ribonucleoprotein F; hnRNP F; nucleolin-like protein mcs94-1; contains: heterogeneous nuclear ribonucleoprotein F, N-terminally processed (HNRNPF, HNRPF)
heterogeneous nuclear ribonucleoprotein G; hnRNP G; RNA-binding motif protein, X chromosome; glycoprotein p43; contains: heterogeneous nuclear ribonucleoprotein G, N-terminally processed (RBMX, HNRPG, RBMXP1)
heterogeneous nuclear ribonucleoprotein H; hnRNP H; contains: heterogeneous nuclear ribonucleoprotein H, N-terminally processed (HNRNPH1, HNRPH, HNRPH1)
heterogeneous nuclear ribonucleoprotein K; hnRNP K; transformation up-regulated nuclear protein; TUNP (HNRNPK, HNRPK)
heterogeneous nuclear ribonucleoprotein M; hnRNP M (HNRNPM, HNRPM, NAGR1)
heterogeneous nuclear ribonucleoprotein Q (hnRNP-Q, synaptotagmin-binding cytoplasmic RNA-interacting protein, glycine- & tyrosine-rich RNA-binding protein, GRY-RBP, NS1-associated protein 1, SYNCRIP, HNRPQ, NSAP1)
heterogeneous nuclear ribonucleoprotein R; hnRNP R (HNRNPR, HNRPR)
heterogeneous nuclear ribonucleoprotein U; hnRNP U; scaffold attachment factor A; SAF-A; p120; pp120 (HNRNPU, HNRPU, SAFA, U211)
heterogeneous nuclear ribonucleoprotein-A2/B1 (hnRNP-A2/B1)
heterogeneous nuclear ribonucleoprotein-C1/C2 (hnRNP-C1/C2)
Intron-binding protein aquarius (intron-binding protein of 160 kD, IBP160, AQR, KIAA0560)
mitogen-activated protein kinase organizer 1; WD repeat domain-containing protein 83; MAPK organizer 1 (WDR83, MORG1)
nucampholin homolog (CWC22, fSAPb, NCM, KIAA1604)
peptidyl-prolyl cis-trans isomerase-like 1 (PPIase, rotamase, PPIL1, CYPL1, CGI-124, UNQ2425/PRO4984)
peptidyl-prolyl cis-trans isomerase-like 3 (PPIase, Rotamase, cyclophilin-like protein PPIL3, cyclophilin J, CyPJ, PPIL3)
peptidylprolyl isomerase domain and WD repeat-containing protein 1 (PPWD1, KIAA0073)
pinin (140 kD nuclear & cell adhesion-related phosphoprotein, domain-rich serine protein, DRS-protein, DRSP, melanoma metastasis clone A protein, desmosome-associated protein, SR-like protein, nuclear protein SDK3, PNN, DRS, MEMA)
pleiotropic regulator 1 (PLRG1)
polyadenylate-binding protein 1; poly(A)-binding protein 1; PABP 1 (PABPC1, PAB1, PABP1, PABPC2)
pre-mRNA splicing factor PRP17 (cell division cycle 40 homolog, EH-binding protein 3, Ehb3)
pre-mRNA-processing factor 19 (PRP19/PSO4 homolog, hPso4, nuclear matrix protein 200, senescence evasion factor, PRPF19, NMP200, PRP19, SNEV)
pre-mRNA-processing factor 6 (PRP6 homolog, U5 snRNP-associated 102 kD protein, U5-102 kD protein, PRPF6, C20orf14)
pre-mRNA-processing-splicing factor 8 (splicing factor Prp8, PRP8 homolog, 220 kD U5 snRNP-specific protein, p220, PRPF8, PRPC8)
pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16; ATP-dependent RNA helicase DHX38; DEAH box protein 38 (DHX38, DDX38, KIAA0224, PRP16)
Pre-mRNA-splicing factor ISY1 homolog (ISY1 KIAA1160)
pre-mRNA-splicing factor RBM22 (RNA-binding motif protein 22 zinc finger CCCH domain-containing protein 16, RBM22, ZC3H16, 199G4)
pre-mRNA-splicing factor SYF2 (CCNDBP1-interactor, p29, SYF2, CBPIN, GCIPIP)
protein C19orf29; renal carcinoma antigen NY-REN-24 (CACTIN)
protein FRG1 (facioscapulohumeral muscular dystrophy region gene 1 protein, FSHD region gene 1 protein, FRG1)
protein mago nashi homolog (MAGOH)
RNA-binding protein 8A; RNA-binding motif protein 8A; ribonucleoprotein RBM8A; RNA-binding protein Y14; binder of OVCA1-1; BOV-1 (RBM8A, RBM8, HSPC114, MDS014)
RNA-binding protein Raly (hnRNP associated with lethal yellow homolog, autoantigen p542, RALY, P542, Ay protein)
serine/arginine repetitive matrix protein 1; SR-related nuclear matrix protein of 160 kD; SRm160; Ser/Arg-related nuclear matrix protein (SRRM1 SRM160)
serine/arginine repetitive matrix protein 2 (serine/arginine-rich splicing factor-related nuclear matrix protein of 300 kD, Ser/Arg-related nuclear matrix protein, SR-related nuclear matrix protein of 300 kD, splicing coactivator subunit SRm300, 300 kD nuclear matrix antigen, SRRM2, KIAA0324, SRL300, SRM300, HSPC075)
serine/threonine protein kinase PRP4 homolog; PRP4 kinase; PRP4 pre-mRNA-processing factor 4 homolog (PRPF4B, KIAA0536, PRP4, PRP4H, PRP4K)
small nuclear ribonucleoprotein F; snRNP-F; Sm protein F (SmF, snRPF, snRNPF)
small nuclear ribonucleoprotein G; snRNP-G; Sm protein G (SmG, SNRPG)
small nuclear ribonucleoprotein [snRNP] polypeptide SmB/B'
small nuclear ribonucleoprotein Sm D1; Sm-D1; Sm-D autoantigen; snRNP core protein D1 (SNRPD1)
small nuclear ribonucleoprotein Sm D2; snRNP core protein D2; Sm-D2 (SNRPD2)
small nuclear ribonucleoprotein Sm D3; snRNP core protein D3; Sm-D3 (SNRPD3)
small nuclear ribonucleoprotein U2B'' (SNRPB2)
SNW domain-containing protein 1; nuclear protein skiP; nuclear receptor coactivator NCoA-62; ski-interacting protein (SNW1, SKIIP, SKIP)
splicing factor 3A subunit 1 (spliceosome associated protein 114, SAP 114, SF3a120, SF3A1)
splicing factor 3A subunit 2 (spliceosome associated protein 62, SAP 62, SF3a66, SF3A2)
splicing factor 3A subunit 3 (spliceosome associated protein 61, SAP 61, SF3a60, SF3A3)
splicing factor 3B subunit 1 (spliceosome associated protein 155, SAP 155, SF3b155, pre-mRNA splicing factor SF3b 155 kD subunit, SF3B1)
splicing factor 3B subunit 2 (spliceosome associated protein 145, SAP 145, SF3b150, pre-mRNA splicing factor SF3b 145 kD subunit, SF3B2)
splicing factor 3B subunit 3 (spliceosome associated protein 130, SAP 130, SF3b130, pre-mRNA splicing factor SF3b 130 kD subunit, SF3B4)
splicing factor U2 auxiliary factor [U2-AF] p35; U2-AF small subunit (U2AF1)
superkiller viralicidic activity 2-like 2; ATP-dependent helicase SKIV2L2 (SKIV2L2, KIAA0052, Mtr4)
THO complex subunit 4; Tho4; Ally of AML-1 & LEF-1; transcriptional coactivator Aly/REF; bZIP-enhancing factor BEF (THOC4, ALY, BEF, ALYREF)
tuftelin-interacting protein 11 (TFIP11)
U1/U2-E protein (snRPE)
U2-A' protein (SNRPA1)
U4/U6.U5 tri-snRNP-associated protein 1 (U4/U6.U5 tri-snRNP-associated 110 kD protein, squamous cell carcinoma antigen recognized by T cells 1, SART-1, hSART-1, hSnu66, SART1)
U6 snRNA-associated Sm-like protein LSm2 (small nuclear ribonuclear protein D homolog, G7b, SnRNP core SM-like protein SM-x5, LSM2, C6orf28, G7B)
U6 snRNA-associated Sm-like protein LSm3 (MDS017)
WD repeat protein 57; Prp8-binding protein; hPRP8BP; U5 snRNP-specific 40 kD protein; 38 kD-splicing factor (WDR57, SNRNP40, PRP8BP, SFP38)
XPA-binding protein 2 (HCNP protein) (XAB2 HCNP KIAA1177 PP3898)
zinc finger CCHC domain-containing protein 8 (ZCCHC8)