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histone-lysine N-methyltransferase 2D; lysine N-methyltransferase 2D; ALL1-related protein; myeloid/lymphoid or mixed-lineage leukemia protein 2 (KMT2D, ALR, MLL2, MLL4)
Function:
- histone methyltransferase
- methylates Lys-4 of histone H3
- histone H3 Lys-4 methylation represents a specific tag for epigenetic transcriptional activation
- plays a central role in beta-globin locus transcription regulation by being recruited by NFE2
- acts as a coactivator for estrogen receptor by being recruited by ESR1, thereby activating transcription
- phosphorylated upon DNA damage, probably by ATM or ATR
- component of the MLL2/MLL3 complex
- interacts with NFE2
- interacts with ESR1; interaction is direct
S-adenosyl-L-methionine + L-lysine-[histone] S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone]
Structure:
- LXXLL motifs 5 & 5 are essential for the association with ESR1 nuclear receptor
- belongs to the histone-lysine methyltransferase family, TRX/MLL subfamily
- contains 1 FYR C-terminal domain
- contains 1 FYR N-terminal domain
- contains 5 PHD-type Zn+2 fingers
- contains 1 post-SET domain
- contains 4 RING-type Zn+2 fingers
- contains 1 SET domain
Compartment:
- nucleus (probable)
Alternative splicing:
- named isoforms=2
Expression:
- expressed in most adult tissues, including a variety of hematoipoietic cells
- not expressed in liver
Pathology:
- mutations in KMT2D are associated with Kabuki syndrome 1
Genetics:
- gene mapped to a chromosomal region involved in duplications & translocations associated with cancer
Note:
- another protein KMT2B/MLL4, located on chromosome 19, was first named MLL2
- thus, KMT2B/MLL4 is often referred to as MLL2 & vice versa in the literature
Related
ALL1-related (ALR) gene or MLL2 gene
General
nuclear protein
N-methyltransferase
phosphoprotein
ring finger protein
Properties
SIZE: entity length = 5537 aa
MW = 593 kD
COMPARTMENT: cell nucleus
MOTIF: Ser phosphorylation site {S27}
Zn finger PHD-type
NAME: Zn finger PHD-type
SITE: 226-276
EFFECTOR-BOUND: Zn+2
cysteine-rich region {229-326}
MOTIF: RING-finger {229-274}
EFFECTOR-BOUND: Zn+2
FOR-BINDING-OF: DNA motif
Zn finger PHD-type
NAME: Zn finger PHD-type
SITE: 273-323
EFFECTOR-BOUND: Zn+2
RING-finger {276-321}
EFFECTOR-BOUND: Zn+2
FOR-BINDING-OF: DNA motif
proline-rich region
SITE: 374-1197
MOTIF: proline residue (SEVERAL)
15 X 5 AA repeats of S/P-P-P-E/P-E/A {439-668}
consensus repeat {442-446}
consensus repeat {460-464}
consensus repeat {469-473}
consensus repeat {496-500}
consensus repeat {504-508}
consensus repeat {521-525}
consensus repeat {555-559}
consensus repeat {564-568}
consensus repeat {573-577}
consensus repeat {582-586}
consensus repeat {609-613}
consensus repeat {618-622}
consensus repeat {627-631}
consensus repeat {645-649}
consensus repeat {663-667}
arginine-rich region {1290-1328}
MOTIF: arginine residue (SEVERAL)
glutamate-rich region {1351-1355}
MOTIF: glutamate residue (SEVERAL)
Zn finger PHD-type
NAME: Zn finger PHD-type
SITE: 1377-1430
EFFECTOR-BOUND: Zn+2
cysteine-rich region {1397-1510}
MOTIF: Zn finger PHD-type
NAME: Zn finger PHD-type
SITE: 1427-1477
EFFECTOR-BOUND: Zn+2
Zn finger PHD-type
NAME: Zn finger PHD-type
SITE: 1504-1559
EFFECTOR-BOUND: Zn+2
MOTIF: RING-finger {1507-1557}
EFFECTOR-BOUND: Zn+2
FOR-BINDING-OF: DNA motif
Ser phosphorylation site {S1606}
Ser phosphorylation site {S1671}
proline-rich region
SITE: 2107-2626
MOTIF: proline residue (SEVERAL)
Ser phosphorylation site {S2274}
Ser phosphorylation site {S2309}
Ser phosphorylation site {S2311}
proline-rich region
SITE: 2385-2392
MOTIF: proline residue (SEVERAL)
coiled coil {2669-2707}
MOTIF: LXXLL motif 1 {2686-2690}
alanine-rich region {2707-2713}
MOTIF: alanine residue (SEVERAL)
glutamine-rich region {2811-2822}
MOTIF: glutamine residue (SEVERAL)
proline-rich region
SITE: 2862-2978
MOTIF: proline residue (SEVERAL)
LXXLL motif 2 {3038-3042}
Ser phosphorylation site {S3130}
Thr phosphorylation site {T3197}
Ser phosphorylation site {S3199}
coiled coil {3249-3282}
glutamine-rich region {3261-4275}
MOTIF: glutamine residue (SEVERAL)
coiled coil {3562-3614}
coiled coil {3714-3750}
coiled coil {3897-3975}
Ser phosphorylation site {S4215}
LXXLL motif 3 {4222-4236}
proline-rich region
SITE: 4241-4360
MOTIF: proline residue (SEVERAL)
LXXLL motif 4 {4253-4257}
Ser phosphorylation site {S4359}
LXXLL motif 5 {4463-4467}
Ser phosphorylation site {S4738}
Ser phosphorylation site {S4822}
proline-rich region
SITE: 4909-4977
MOTIF: proline residue (SEVERAL)
LXXLL motif 6 {4990-4994}
RING-finger {5092-5137}
EFFECTOR-BOUND: Zn+2
FOR-BINDING-OF: DNA motif
FYR N-terminal {5175-5235}
FYR C-terminal {5236-5321}
SET domain {5397-5513}
MOTIF: binding site
SITE: 5451-5451
FOR-BINDING-OF: S-adenosylmethionine
S-adenosyl-L-methionine binding {5474-5475}
Zn+2-binding site
SITE: 5477-5477
post-SET domain {5521-5537}
MOTIF: Zn+2-binding site
SITE: 5525-5525
Zn+2-binding site
SITE: 5527-5527
Zn+2-binding site
SITE: 5532-5532
Database Correlations
OMIM 602113
UniProt O14686
PFAM correlations
Entrez Gene 8085
Kegg hsa:8085
ENZYME 2.1.1.43
References
- UniProt :accession O14686
- OMIM :accession 159559
Component-of
ASC-2/NCOA6 complex (MLL2/MLL3 complex, ASCOM complex)