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protein synthesis termination
Biochemistry:
* see figure 1
- protein synthesis 17
- substrate: eukaryotic release factor + 80S-termination complex :p-site transfer RNA :amino-acyl peptide :product 80S-elongation complex (GDP, RNA-binding motif - UAG) :a-site eukaryotic release factor (peptidyl transferase) :p-site transfer RNA :amino-acyl protein
* see figure 2
- protein synthesis 18
- enzyme: peptidyl transferase
- substrate: 80S-termination complex :a-site eukaryotic release factor (peptidyl transferase, GDP, RNA-binding motif - UAG) :p-site transfer RNA :amino-acyl protein :product 80S-termination complex :a-site eukaryotic release factor (peptidyl transferase, GTP, RNA-binding motif - UAG) :p-site transfer RNA :amino-acyl unbound + protein
* see figure 3
- protein synthesis 19
- substrate: 80S-termination complex :a-site eukaryotic release factor (peptidyl transferase, GTP, RNA-binding motif - UAG) :p-site transfer RNA :amino-acyl unbound :product 60S-ribosomal subunit + 40S-ribosomal subunit) + messenger RNA + CAP-binding protein + + transfer RNA :amino-acyl unbound + eukaryotic release factor (GDP) + H2PO4-
General
protein synthesis
Properties
EVENTS: binding
SUBSTRATE: eukaryotic release factor
COMPARTMENT: cytoplasm
CELL: most cell types*
ORGANISM: eukaryote*
MOTIF: guanine nucleotide-binding site
EFFECTOR-BOUND: guanosine triphosphate
binding site
FOR-BINDING-OF: peptidyl transferase
RNA-binding motif
FOR-BINDING-OF: ribonucleic acid
80S termination complex
COMPARTMENT: cytoplasm
MOTIF: active site
allosteric site
P-SITE: transfer RNA
MOTIF: anticodon loop
AMINO-ACYL: peptide
A-SITE: eukaryotic release factor
MOTIF: guanine nucleotide-binding site
EFFECTOR-BOUND: guanosine triphosphate
binding site
EFFECTOR-BOUND: peptidyl transferase
RNA-binding motif
EFFECTOR-BOUND: termination codon
PRODUCT: 80S elongation complex
COMPARTMENT: cytoplasm
MOTIF: active site
allosteric site
P-SITE: transfer RNA
MOTIF: anticodon loop
AMINO-ACYL: protein
A-SITE: eukaryotic release factor
MOTIF: guanine nucleotide-binding site
EFFECTOR-BOUND: guanosine triphosphate
binding site
EFFECTOR-BOUND: peptidyl transferase
RNA-binding motif
EFFECTOR-BOUND: termination codon
TAG: PROTEIN-SYNTHESIS-17
enzymatic reaction
ENZYME: peptidyl transferase
COMPARTMENT: cytoplasm
CELL: most cell types*
ORGANISM: eukaryote*
MOTIF: active site
SUBSTRATE: 80S termination complex
COMPARTMENT: cytoplasm
MOTIF: active site
allosteric site
P-SITE: transfer RNA
MOTIF: anticodon loop
AMINO-ACYL: protein
A-SITE: eukaryotic release factor
MOTIF: guanine nucleotide-binding site
EFFECTOR-BOUND: guanosine triphosphate
binding site
EFFECTOR-BOUND: peptidyl transferase
RNA-binding motif
EFFECTOR-BOUND: termination codon
PRODUCT: 80S termination complex
COMPARTMENT: cytoplasm
MOTIF: active site
allosteric site
P-SITE: transfer RNA
MOTIF: anticodon loop
A-SITE: eukaryotic release factor
MOTIF: guanine nucleotide-binding site
EFFECTOR-BOUND: guanosine triphosphate
binding site
EFFECTOR-BOUND: peptidyl transferase
RNA-binding motif
EFFECTOR-BOUND: termination codon
protein
TAG: PROTEIN-SYNTHESIS-18
chemical reaction
SUBSTRATE: 80S termination complex
COMPARTMENT: cytoplasm
MOTIF: active site
allosteric site
P-SITE: transfer RNA
MOTIF: anticodon loop
A-SITE: eukaryotic release factor
MOTIF: guanine nucleotide-binding site
EFFECTOR-BOUND: guanosine triphosphate
binding site
EFFECTOR-BOUND: peptidyl transferase
RNA-binding motif
EFFECTOR-BOUND: termination codon
PRODUCT: 60S ribosomal subunit
COMPARTMENT: cytoplasm
40S ribosomal subunit
COMPARTMENT: cytoplasm
messenger RNA
TEMPLATE-FOR: protein
eukaryotic initiation factor-4E
COMPARTMENT: cytoplasm
CELL: most cell types*
ORGANISM: eukaryote*
MOTIF: RNA-binding motif
FOR-BINDING-OF: inverted GTP 5' cap structure
transfer RNA
COMPARTMENT: cytoplasm
MOTIF: anticodon loop
eukaryotic release factor
COMPARTMENT: cytoplasm
CELL: most cell types*
ORGANISM: eukaryote*
MOTIF: guanine nucleotide-binding site
EFFECTOR-BOUND: guanosine triphosphate
binding site
FOR-BINDING-OF: peptidyl transferase
RNA-binding motif
FOR-BINDING-OF: ribonucleic acid
guanine nucleotide-binding site
EFFECTOR-BOUND: guanosine diphosphate
H2PO4-
TAG: PROTEIN-SYNTHESIS-19