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Specific
14-3-3 binding motif
actin-binding site
active site
acyl-CoA-binding domain (ACB domain)
ADP-ribosylation site
allosteric site
alpha fibrous protein heptad
alpha helix
amidation site
annexin repeat
armadillo [arm] domain
Armadillo/plakoglobin ARM repeat
baculovirus IAP repeat
BC complex binding domain (BC box)
bcl-2 homology (BH) domain
beta pleated sheet
box1 motif
box2 motif
breakpoint
bromodomain
BTK domain
C-terminal cystine knot (CTCK)
CaaX motif
cadherin domain (cadherin repeat)
carbohydrate-recognition domain (C type lectin domain, CTL, CRD)
copper fist
CRAL-TRIO lipid binding domain
cyclin box
DAPIN domain (pyrin N-terminal homology domain, PYD PAAD)
Dbl homology (DH) domain
death domain (DD)
death effector domain (DED)
DExH box
DHR domain (GLGF domain)
dishevelled, egl-10, pleckstrin (DEP) domain
disulfide bridge
DNA-binding motif
doublecortin domain
ELKL box
FERM domain (band 4.1 family domain)
FF domain
fibrinogen C domain
fibronectin module
filamin/ABP280 repeat
FLVRES motif
Focal Adhesion Targeting (FAT) domain
forkhead-associated (FHA) domain
G-patch domain
glycosylation site
GoLoco domain
greek key
HECT (homologous to E6-AP carboxyl terminus) domain
helix-loop-helix (HLH)
hemopexin domain
heptad repeat
HIGH motif
HIN-200 domain
hinge region
HIstidine Triad (HIT domain)
HNK-1 carbohydrate structure
hydrophobic domain
hydroxylation site
immunoglobulin superfamily domain
immunoreceptor tyrosine-based activator motif (ITAM)
immunoreceptor tyrosine-based inhibitory motif (ITIM)
immunoreceptor tyrosine-based switch motif
insertion site
interferon regulatory factor [IRF] family signature (tryptophan pentad repeat)
internalization signal
IQ motif
ITIM-like motif
J domain (dnaJ domain)
kelch repeat
KFERQ lysosomal targeting signal
kringle domain
KXFFKR motif
L27 domain (Maguk recruitment domain)
LEM domain
ligand-binding site
LXC motif
Lys-Lys (di-lysine motif)
Mad homology 1 domain
Mad homology 2 domain
MADS domain or MADS box
melanoma-associated antigen (MAGE) domain
metal ion-binding site
microbody-targeting signal or peroxisomal-targeting sequence
mitochondrial carrier protein motif
mRNA autoregulation signal
N module
Notch/ankyrin repeat
nuclear export signal
nuclear translocation signal (nuclear localization signal, NLS)
nucleolar localization signal (NLS*)
Nudix box
OTU (Ovarian TUmor) domain
P-element induced wimpy testis in Drosophila; Piwi domain; Sting domain; Piwi box
paired amphipathic helix (PAH) domain
PAS-associated C-terminal motif (PAC domain)
peptide methylation site
peroxisome targeting signal
phosphorylation site
phox homology [PX] domain
Piwi, Argonaute & Zwille/Pinhead (PAZ) domain
pleckstrin homology [PH] domain
POLO box domain
polyglutamine tract
PPXXF motif
proteasome/cyclosome repeat (PC repeat)
proteolytic site
PSTAIRE motif
purine nucleotide-binding site
Q motif
Ran binding domain type 1 (RanBD1)
ras binding or RA (RalGDS/AF-6;Ras-associating) domain
RCC1 repeat
RGD cell-attachment sequence
RNA polymerase-2 CTD consensus repeat
RNA-binding motif
Rossmann fold
runt domain
S1 RNA-binding domain
Sac phosphatase domain
SCAN domain
selenocysteine residue
serpin motif
SET domain
SH3-binding site
signal recognition sequence (SRS)
signal sequence (signal peptide)
Smad4 activation domain (SAD)
SOCS box domain
specific amino acid-enriched region (low complexity region)
spectrin repeat
StAR-related lipid-transfer (START) domain
sterile alpha motif (SAM)
SVKImotif
tetratricopeptide repeat (TPR repeat)
thiolactone
thrombospondin (TSP) domain
thrombospondin module
trefoil domain
ubiquitination site (destruction box, D-box)
VHS domain
villin headpiece domain (VHP, HP)
VWFA domain
VWFB domain
VWFC domain
VWFD domain
WAP-4 disulfide core
WD repeat
WKS motif
WSXWS motif
WW domain (W/rsp5/WWP domain)
YWTD
[NKR]KIAxRE domain
General
motif