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nucleophosmin; NPM; nucleolar phosphoprotein B23; numatrin; nucleolar protein NO38; nucleoplasmin 1 (NPM1, NPM)
Function:
- role in diverse cellular processes including:
a) ribosome biogenesis
b) centrosome duplication
c) protein chaperoning
d) histone assembly
e) cell proliferation
f) regulation of tumor suppressors TP53/p53 & ARF
- binds ribosomes presumably to drive ribosome nuclear export associated with nucleolar ribonucleoprotein structures
- binds single-stranded nucleic acids
- acts as a chaperonin for the core histones histoneH3, histone H2B & histone H4
- acetylated at C-terminal Lys, thereby increasing affinity to histones
- ADP-ribosylated
- phosphorylated at Ser-4 by PLK1
- phosphorylated by CDK2 at Ser-125 & Thr-199
- phosphorylation at Thr-199 may trigger initiation of centrosome duplication
- phosphorylated by CDC2 at Thr-199, Thr-219, Thr-234 & Thr-237 during cell mitosis; when these 4 sites are phosphorated, RNA-binding activity seems to be abolished
- may be phosphoryled at Ser-70 by NEK2
- sumoylated by ARF
- component of SWAP complex
- interacts with NSUN2
- interacts with hepatitis delta virus S-HDAg
Structure:
- decamer formed by two pentameric rings associated in a head-to-head fashion
- disulfide-linked dimers under certain conditions
- belongs to the nucleoplasmin family
Compartment:
- nucleus, nucleolus
- generally nucleolar, but is translocated to the nucleoplasm in case of serum starvation or treatment with anticancer drugs
- has been found in the cytoplasm in patients with primary acute myelogenous leukemia (AML), but not with secondary AML
- can shuttle between cytoplasm & nucleus
Alternative splicing: named isoforms=2
Pathology:
- chromosomal translocation t(2;5)(p23;q35.1) involving NPM1 with ALK is found in a form of non-Hodgkin lymphoma; the resulting chimeric NPM1-ALK protein homodimerize & the kinase becomes constitutively activated
- chromosomal translocation t(5;17)(q32;q11) involving NPM1 with RARA is found in a form of acute promyelocytic leukemia
- chromosomal translocation t(3;5)(q25.1;q34) involving NPM1 with MLF1 is a cause of myelodysplastic syndrome (MDS)
- defects in NPM1 are associated with acute myelogenous leukemia (AML); mutations in exon 12 affecting the C-terminus of NPM1 are associated with an aberrant cytoplasmic location
Related
NPM (nucleophsomin) gene
General
nucleoplasmin
phosphoprotein
Properties
SIZE: entity length = 294 aa
MW = 33 kD
COMPARTMENT: cytoplasm
cell nucleus
MOTIF: acetylation site
SITE: N-TERMINUS
EFFECTOR-BOUND: acetyl
Ser phosphorylation site {S4}
Ser phosphorylation site {S10}
Ser phosphorylation site {S70}
Thr phosphorylation site {T75}
Ser phosphorylation site {S88}
Thr phosphorylation site {T95}
Ser phosphorylation site {S106}
acidic region {120-132}
MOTIF: acidic residue (SEVERAL)
Ser phosphorylation site {S125}
Ser phosphorylation site {S137}
Ser phosphorylation site {S139}
nuclear translocation signal {152-157}
acidic region {161-188}
MOTIF: acidic residue (SEVERAL)
breakpoint {175-176}
nuclear translocation signal {191-197}
Thr phosphorylation site {T199}
Thr phosphorylation site {T219}
Thr phosphorylation site {T234}
Thr phosphorylation site {T237}
Ser phosphorylation site {S243}
Ser phosphorylation site {S254}
Ser phosphorylation site {S260}
Thr phosphorylation site {T279}
Database Correlations
OMIM 164040
UniProt P06748
Pfam PF03066
Entrez Gene 4869
References
- UniProt :accession P06748
- Atlas of Genetics & Cytogenetics in Oncology & Haematology
http://atlasgeneticsoncology.org/genes/NPM1.html