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matrix metalloproteinase-3 (matrixin-3, stromelysin-1, transin-1, SL-1, MMP3, STMY1)
Function:
1) degradation of
a) fibronectin
b) laminin
c) gelatins of type 1, 3, 4, & 5
d) collagens 3, 4, 9, 10
e) cartilage proteoglycans
2) activates procollagenase
3) preferential cleavage where P1', P2' & P3' are hydrophobic residues
Cofactor:
- binds 4 Ca+2 per subunit
- binds 2 Zn+2 per subunit
Structure:
- conserved Cys present in the cysteine-switch motif binds the catalytic Zn+2, thus inhibiting the enzyme; dissociation of the Cys from the Zn+2 upon the activation-peptide release activates the enzyme
- belongs to the peptidase M10A family
- contains 4 hemopexin-like domains
Laboratory:
- stromelysin-1 in serum/plasma
General
Ca+2 binding protein
glycoprotein
matrixin or matrix metalloproteinase
Properties
SIZE: entity length = 477 aa
MW = 54 kD
COMPARTMENT: extracellular matrix
MOTIF: signal sequence {1-17}
Cysteine switch {90-97}
MOTIF: Zn+2-binding site
SITE: 92-92
N-glycosylation site {N120}
Ca+2-binding site
SITE: 124-124
Ca+2-binding site
SITE: 158-158
Zn+2-binding site
SITE: 168-168
Zn+2-binding site
SITE: 170-170
Ca+2-binding site
SITE: 175-175
Ca+2-binding site
SITE: 176-176
Ca+2-binding site
SITE: 178-178
Ca+2-binding site
SITE: 180-180
Zn+2-binding site
SITE: 183-183
Ca+2-binding site
SITE: 190-190
Ca+2-binding site
SITE: 192-192
Ca+2-binding site
SITE: 194-194
Zn+2-binding site
SITE: 196-196
Ca+2-binding site
SITE: 198-198
Ca+2-binding site
SITE: 199-199
Ca+2-binding site
SITE: 201-201
Zn+2-binding site
SITE: 218-218
glutamate residue {E219}
Zn+2-binding site
SITE: 222-222
Zn+2-binding site
SITE: 228-228
cysteine residue {C290}
MODIFICATION: cysteine residue {C477}
Hemopexin-like 1 {296-338}
MOTIF: Ca+2-binding site
SITE: 297-297
Hemopexin-like 2 {340-383}
Hemopexin-like 3 {388-435}
MOTIF: Ca+2-binding site
SITE: 389-389
Hemopexin-like 4 {437-477}
MOTIF: Ca+2-binding site
SITE: 438-438
cysteine residue {C477}
MODIFICATION: cysteine residue {C290}
SECRETED-BY: fibroblast
Database Correlations
OMIM correlations
MORBIDMAP 164015
UniProt P08254
PFAM correlations
Entrez Gene 4314
Kegg hsa:4314
ENZYME 3.4.24.17
References
- UniProt :accession P08254
- SeattleSNPs
http://pga.gs.washington.edu/data/mmp3/