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insulin-like growth factor 2 mRNA-binding protein 3 (IGF2 mRNA-binding protein 3, IGF-2 mRNA-binding protein 3, IMP-3, KH domain-containing protein overexpressed in cancer, hKOC, VICKZ family member 3, IGF2BP3, IMP3, KOC1, VICKZ3)
Function:
1) RNA-binding protein
2) regulator of mRNA translation & stability
3) binds to the 5'-UTR of IGF2 mRNA
4) binds to sequences in the 3'-UTR of CD44 mRNA
Structure:
- homodimer & multimer
- belongs to the RRM IMP/VICKZ family
- contains 4 KH domains
- contains 2 RRM repeats (RNA recognition motif)
Compartment:
- nucleus, cytoplasm
- found in lamellipodia of leading edge, in perinuclear region, & beneath the plasma membrane
- subcytoplasmic localization is cell specific & regulated by cell contact & growth
- localized at connecting piece & tail of spermatozoa
- colocalized with CD44 mRNA in RNP granules
Alternative splicing: named isoforms=3
Expression:
- expressed in fetal liver, lung, kidney, thymus, placenta, follicles of ovary & gonocytes of testis
- expressed in growing oocytes, spermatogonia & semen
- ubiquitously during fetal development at 8 & 14 weeks of gestation
Pathology:
- expressed in cervical cancer (adenocarcinoma)
- expressed in testicular cancer
- expressed in pancreatic cancer
- expressed in renal-cell carcinomas
- expressed in ovarian cancer
- autoantibodies against IGF2BP3 are detected in sera from some patients with a variety of carcinomas
General
RNA-binding protein
Properties
SIZE: MW = 64 kD
entity length = 579 aa
COMPARTMENT: cytoplasm
cell nucleus
MOTIF: RNP motif
NAME: RNP motif
SITE: 2-75
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
RNP motif
NAME: RNP motif
SITE: 81-156
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
NAME: ribonucleoprotein-1 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
ribonucleoprotein-2 motif
FOR-BINDING-OF: ribonucleic acid
MOTIF: ribonucleoprotein-1 motif
ribonucleoprotein-2 motif
KH domain
SITE: 195-260
FOR-BINDING-OF: ribonucleic acid
KH domain
SITE: 276-343
FOR-BINDING-OF: ribonucleic acid
KH domain
SITE: 405-470
FOR-BINDING-OF: ribonucleic acid
KH domain
SITE: 487-553
FOR-BINDING-OF: ribonucleic acid
Database Correlations
OMIM 608259
UniProt O00425
PFAM correlations
References
UniProt :accession O00425