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protein SMG5 (SMG-5 homolog, EST1-like protein B, LPTS-interacting protein, LPTS-RP1, SMG5, EST1B, KIAA1089)
Function:
1) role in nonsense-mediated mRNA decay
2) promotes dephosphorylation of RENT1
3) necessary for TERT activity
4) interacts with TERT, PP2AC & SMG1
5) component of a complex that contains SMG1, SMG5, SMG7, PP2AC, a short isoform of UPF3A (isoform UPF3AS, but not isoform UPF3AL) & phosphorylated RENT1
- not detected in complexes that contain unphosphorylated RENT1
6) detected in cytoplasmic mRNA decay bodies
Structure: contains 1 PINc domain
Compartment:
- cytoplasm, nucleus
- shuttles between nucleus & cytoplasm
Expression: ubiquitous
General
other protein
Properties
SIZE: MW = 114 kD
entity length = 1016 aa
COMPARTMENT: cytoplasm
cell nucleus
MOTIF: arginine-rich region {460-463}
MOTIF: arginine residue (SEVERAL)
glutamate-rich region {529-532}
MOTIF: glutamate residue (SEVERAL)
coiled coil {798-841}
PINc {872-995}
Database Correlations
UniProt Q9UPR3
References
UniProt :accession Q9UPR3